“KubeGene” a Genome Sequencing Workflow Management Framework - Shenjun Tang, Huawei

“KubeGene” a Genome Sequencing Workflow Management Framework - Shenjun Tang, Huawei

“KubeGene” a Genome Sequencing Workflow Management Framework - In this presentation, Tangshengjun will provide an overview of “KubeGene” a bio-genetic management framework built on top of Kubernetes platform for managing TB/PB of data deployed across a cluster with hundreds of nodes. “KubeGene” supports data-processing pipelines for Whole Genome Sequencing (WGS), Whole Exome Sequencing (WES), liquid biopsy, single cell sequencing and other sequencing scenarios with best practices, like Genome Analysis Toolkit (GATK), on the Kubernetes cluster. Furthermore, “KubeGene” can easily deploy a cluster-based data-science platform for data-mining based on the processed data. In conclusion, “KubeGene” provides users with full-stack, easy-to-use, scalable bio-genetic cloud computing solution.

“KubeGene” a Genome Sequencing Workflow Management Framework - Shenjun Tang, Huawei

In the recent years, exponential growth of genetic data makes it hard for researchers to do analysis on a traditional computers. In this presentation, Tangshengjun will provide an overview of “KubeGene” a bio-genetic management framework built on top of Kubernetes platform for managing TB/PB of data deployed across a cluster with hundreds of nodes. “KubeGene” supports data-processing pipelines for Whole Genome Sequencing (WGS), Whole Exome Sequencing (WES), liquid biopsy, single cell sequencing and other sequencing scenarios with best practices, like Genome Analysis Toolkit (GATK), on the Kubernetes cluster. Furthermore, “KubeGene” can easily deploy a cluster-based data-science platform for data-mining based on the processed data. In conclusion, “KubeGene” provides users with full-stack, easy-to-use, scalable bio-genetic cloud computing solution.

kubegene kubernetes

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