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In this tutorial, you will learn how you can extract tables in PDF using camelot library in Python. Camelot is a Python library and a command-line tool that makes it easy for anyone to extract data tables trapped inside PDF files, check their official documentation and Github repository. Let’s dive in !
First, you need to install required dependencies for this library to work properly, and then you can install the library using the command line:
pip3 install camelot-py[cv]
Note that you need to make sure that you have Tkinter and ghostscript (which are the required dependencies) installed properly in your computer
Now that you have installed all requirements for this tutorial, open up a new Python file and follow along:
import camelot
# PDF file to extract tables from
file = "foo.pdf"
I have a PDF file in the current directory called “foo.pdf” which is a normal page that contains one table shown in the following image:
Just a random table, let’s extract it in Python:
# extract all the tables in the PDF file
tables = camelot.read_pdf(file)
read_pdf() function extracts all tables in a PDF file, let’s print number of tables extracted:
# number of tables extracted
print("Total tables extracted:", tables.n)
This outputs:
Total tables extracted: 1
Sure enough, it contains only one table, printing this table as a Pandas DataFrame:
# print the first table as Pandas DataFrame
print(tables[0].df)
Output:
0 1 2 3 4 5 6
0 Cycle \nName KI \n(1/km) Distance \n(mi) Percent Fuel Savings
1 Improved \nSpeed Decreased \nAccel Eliminate \nStops Decreased \nIdle
2 2012_2 3.30 1.3 5.9% 9.5% 29.2% 17.4%
3 2145_1 0.68 11.2 2.4% 0.1% 9.5% 2.7%
4 4234_1 0.59 58.7 8.5% 1.3% 8.5% 3.3%
5 2032_2 0.17 57.8 21.7% 0.3% 2.7% 1.2%
6 4171_1 0.07 173.9 58.1% 1.6% 2.1% 0.5%
That’s precise, let’s export the table to a CSV file:
# export individually
tables[0].to_csv("foo.csv")
Or if you want to export all tables in one go:
# or export all in a zip
tables.export("foo.csv", f="csv", compress=True)
f parameter indicates the file format, in this case “csv”. By setting compress parameter equals to True, this will create a ZIP file that contains all the tables in CSV format.
You can also export the tables to HTML format:
# export to HTML
tables.export("foo.html", f="html")
You can also export to other formats such as JSON and Excel.
It is worth to note that Camelot only works with text-based PDFs and not scanned documents. If you can click and drag to select text in your table in a PDF viewer, then it is a text-based PDF, so this will work on papers, books, documents and much more!
So this won’t convert image characters to digital text, if you wish so, I have a tutorial that uses OCR techniques to convert image optical characters to actual text that can be manipulated in Python.
Alright, this is it for this tutorial, check their official documentation for a more information.
View GitHub : https://github.com/camelot-dev/camelot
#python #pdf
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The development has moved to https://github.com/camelot-dev/camelot. Please update the link in the post. Thanks!
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Perl script converts PDF files to Gerber format
Pdf2Gerb generates Gerber 274X photoplotting and Excellon drill files from PDFs of a PCB. Up to three PDFs are used: the top copper layer, the bottom copper layer (for 2-sided PCBs), and an optional silk screen layer. The PDFs can be created directly from any PDF drawing software, or a PDF print driver can be used to capture the Print output if the drawing software does not directly support output to PDF.
The general workflow is as follows:
Please note that Pdf2Gerb does NOT perform DRC (Design Rule Checks), as these will vary according to individual PCB manufacturer conventions and capabilities. Also note that Pdf2Gerb is not perfect, so the output files must always be checked before submitting them. As of version 1.6, Pdf2Gerb supports most PCB elements, such as round and square pads, round holes, traces, SMD pads, ground planes, no-fill areas, and panelization. However, because it interprets the graphical output of a Print function, there are limitations in what it can recognize (or there may be bugs).
See docs/Pdf2Gerb.pdf for install/setup, config, usage, and other info.
#Pdf2Gerb config settings:
#Put this file in same folder/directory as pdf2gerb.pl itself (global settings),
#or copy to another folder/directory with PDFs if you want PCB-specific settings.
#There is only one user of this file, so we don't need a custom package or namespace.
#NOTE: all constants defined in here will be added to main namespace.
#package pdf2gerb_cfg;
use strict; #trap undef vars (easier debug)
use warnings; #other useful info (easier debug)
##############################################################################################
#configurable settings:
#change values here instead of in main pfg2gerb.pl file
use constant WANT_COLORS => ($^O !~ m/Win/); #ANSI colors no worky on Windows? this must be set < first DebugPrint() call
#just a little warning; set realistic expectations:
#DebugPrint("${\(CYAN)}Pdf2Gerb.pl ${\(VERSION)}, $^O O/S\n${\(YELLOW)}${\(BOLD)}${\(ITALIC)}This is EXPERIMENTAL software. \nGerber files MAY CONTAIN ERRORS. Please CHECK them before fabrication!${\(RESET)}", 0); #if WANT_DEBUG
use constant METRIC => FALSE; #set to TRUE for metric units (only affect final numbers in output files, not internal arithmetic)
use constant APERTURE_LIMIT => 0; #34; #max #apertures to use; generate warnings if too many apertures are used (0 to not check)
use constant DRILL_FMT => '2.4'; #'2.3'; #'2.4' is the default for PCB fab; change to '2.3' for CNC
use constant WANT_DEBUG => 0; #10; #level of debug wanted; higher == more, lower == less, 0 == none
use constant GERBER_DEBUG => 0; #level of debug to include in Gerber file; DON'T USE FOR FABRICATION
use constant WANT_STREAMS => FALSE; #TRUE; #save decompressed streams to files (for debug)
use constant WANT_ALLINPUT => FALSE; #TRUE; #save entire input stream (for debug ONLY)
#DebugPrint(sprintf("${\(CYAN)}DEBUG: stdout %d, gerber %d, want streams? %d, all input? %d, O/S: $^O, Perl: $]${\(RESET)}\n", WANT_DEBUG, GERBER_DEBUG, WANT_STREAMS, WANT_ALLINPUT), 1);
#DebugPrint(sprintf("max int = %d, min int = %d\n", MAXINT, MININT), 1);
#define standard trace and pad sizes to reduce scaling or PDF rendering errors:
#This avoids weird aperture settings and replaces them with more standardized values.
#(I'm not sure how photoplotters handle strange sizes).
#Fewer choices here gives more accurate mapping in the final Gerber files.
#units are in inches
use constant TOOL_SIZES => #add more as desired
(
#round or square pads (> 0) and drills (< 0):
.010, -.001, #tiny pads for SMD; dummy drill size (too small for practical use, but needed so StandardTool will use this entry)
.031, -.014, #used for vias
.041, -.020, #smallest non-filled plated hole
.051, -.025,
.056, -.029, #useful for IC pins
.070, -.033,
.075, -.040, #heavier leads
# .090, -.043, #NOTE: 600 dpi is not high enough resolution to reliably distinguish between .043" and .046", so choose 1 of the 2 here
.100, -.046,
.115, -.052,
.130, -.061,
.140, -.067,
.150, -.079,
.175, -.088,
.190, -.093,
.200, -.100,
.220, -.110,
.160, -.125, #useful for mounting holes
#some additional pad sizes without holes (repeat a previous hole size if you just want the pad size):
.090, -.040, #want a .090 pad option, but use dummy hole size
.065, -.040, #.065 x .065 rect pad
.035, -.040, #.035 x .065 rect pad
#traces:
.001, #too thin for real traces; use only for board outlines
.006, #minimum real trace width; mainly used for text
.008, #mainly used for mid-sized text, not traces
.010, #minimum recommended trace width for low-current signals
.012,
.015, #moderate low-voltage current
.020, #heavier trace for power, ground (even if a lighter one is adequate)
.025,
.030, #heavy-current traces; be careful with these ones!
.040,
.050,
.060,
.080,
.100,
.120,
);
#Areas larger than the values below will be filled with parallel lines:
#This cuts down on the number of aperture sizes used.
#Set to 0 to always use an aperture or drill, regardless of size.
use constant { MAX_APERTURE => max((TOOL_SIZES)) + .004, MAX_DRILL => -min((TOOL_SIZES)) + .004 }; #max aperture and drill sizes (plus a little tolerance)
#DebugPrint(sprintf("using %d standard tool sizes: %s, max aper %.3f, max drill %.3f\n", scalar((TOOL_SIZES)), join(", ", (TOOL_SIZES)), MAX_APERTURE, MAX_DRILL), 1);
#NOTE: Compare the PDF to the original CAD file to check the accuracy of the PDF rendering and parsing!
#for example, the CAD software I used generated the following circles for holes:
#CAD hole size: parsed PDF diameter: error:
# .014 .016 +.002
# .020 .02267 +.00267
# .025 .026 +.001
# .029 .03167 +.00267
# .033 .036 +.003
# .040 .04267 +.00267
#This was usually ~ .002" - .003" too big compared to the hole as displayed in the CAD software.
#To compensate for PDF rendering errors (either during CAD Print function or PDF parsing logic), adjust the values below as needed.
#units are pixels; for example, a value of 2.4 at 600 dpi = .0004 inch, 2 at 600 dpi = .0033"
use constant
{
HOLE_ADJUST => -0.004 * 600, #-2.6, #holes seemed to be slightly oversized (by .002" - .004"), so shrink them a little
RNDPAD_ADJUST => -0.003 * 600, #-2, #-2.4, #round pads seemed to be slightly oversized, so shrink them a little
SQRPAD_ADJUST => +0.001 * 600, #+.5, #square pads are sometimes too small by .00067, so bump them up a little
RECTPAD_ADJUST => 0, #(pixels) rectangular pads seem to be okay? (not tested much)
TRACE_ADJUST => 0, #(pixels) traces seemed to be okay?
REDUCE_TOLERANCE => .001, #(inches) allow this much variation when reducing circles and rects
};
#Also, my CAD's Print function or the PDF print driver I used was a little off for circles, so define some additional adjustment values here:
#Values are added to X/Y coordinates; units are pixels; for example, a value of 1 at 600 dpi would be ~= .002 inch
use constant
{
CIRCLE_ADJUST_MINX => 0,
CIRCLE_ADJUST_MINY => -0.001 * 600, #-1, #circles were a little too high, so nudge them a little lower
CIRCLE_ADJUST_MAXX => +0.001 * 600, #+1, #circles were a little too far to the left, so nudge them a little to the right
CIRCLE_ADJUST_MAXY => 0,
SUBST_CIRCLE_CLIPRECT => FALSE, #generate circle and substitute for clip rects (to compensate for the way some CAD software draws circles)
WANT_CLIPRECT => TRUE, #FALSE, #AI doesn't need clip rect at all? should be on normally?
RECT_COMPLETION => FALSE, #TRUE, #fill in 4th side of rect when 3 sides found
};
#allow .012 clearance around pads for solder mask:
#This value effectively adjusts pad sizes in the TOOL_SIZES list above (only for solder mask layers).
use constant SOLDER_MARGIN => +.012; #units are inches
#line join/cap styles:
use constant
{
CAP_NONE => 0, #butt (none); line is exact length
CAP_ROUND => 1, #round cap/join; line overhangs by a semi-circle at either end
CAP_SQUARE => 2, #square cap/join; line overhangs by a half square on either end
CAP_OVERRIDE => FALSE, #cap style overrides drawing logic
};
#number of elements in each shape type:
use constant
{
RECT_SHAPELEN => 6, #x0, y0, x1, y1, count, "rect" (start, end corners)
LINE_SHAPELEN => 6, #x0, y0, x1, y1, count, "line" (line seg)
CURVE_SHAPELEN => 10, #xstart, ystart, x0, y0, x1, y1, xend, yend, count, "curve" (bezier 2 points)
CIRCLE_SHAPELEN => 5, #x, y, 5, count, "circle" (center + radius)
};
#const my %SHAPELEN =
#Readonly my %SHAPELEN =>
our %SHAPELEN =
(
rect => RECT_SHAPELEN,
line => LINE_SHAPELEN,
curve => CURVE_SHAPELEN,
circle => CIRCLE_SHAPELEN,
);
#panelization:
#This will repeat the entire body the number of times indicated along the X or Y axes (files grow accordingly).
#Display elements that overhang PCB boundary can be squashed or left as-is (typically text or other silk screen markings).
#Set "overhangs" TRUE to allow overhangs, FALSE to truncate them.
#xpad and ypad allow margins to be added around outer edge of panelized PCB.
use constant PANELIZE => {'x' => 1, 'y' => 1, 'xpad' => 0, 'ypad' => 0, 'overhangs' => TRUE}; #number of times to repeat in X and Y directions
# Set this to 1 if you need TurboCAD support.
#$turboCAD = FALSE; #is this still needed as an option?
#CIRCAD pad generation uses an appropriate aperture, then moves it (stroke) "a little" - we use this to find pads and distinguish them from PCB holes.
use constant PAD_STROKE => 0.3; #0.0005 * 600; #units are pixels
#convert very short traces to pads or holes:
use constant TRACE_MINLEN => .001; #units are inches
#use constant ALWAYS_XY => TRUE; #FALSE; #force XY even if X or Y doesn't change; NOTE: needs to be TRUE for all pads to show in FlatCAM and ViewPlot
use constant REMOVE_POLARITY => FALSE; #TRUE; #set to remove subtractive (negative) polarity; NOTE: must be FALSE for ground planes
#PDF uses "points", each point = 1/72 inch
#combined with a PDF scale factor of .12, this gives 600 dpi resolution (1/72 * .12 = 600 dpi)
use constant INCHES_PER_POINT => 1/72; #0.0138888889; #multiply point-size by this to get inches
# The precision used when computing a bezier curve. Higher numbers are more precise but slower (and generate larger files).
#$bezierPrecision = 100;
use constant BEZIER_PRECISION => 36; #100; #use const; reduced for faster rendering (mainly used for silk screen and thermal pads)
# Ground planes and silk screen or larger copper rectangles or circles are filled line-by-line using this resolution.
use constant FILL_WIDTH => .01; #fill at most 0.01 inch at a time
# The max number of characters to read into memory
use constant MAX_BYTES => 10 * M; #bumped up to 10 MB, use const
use constant DUP_DRILL1 => TRUE; #FALSE; #kludge: ViewPlot doesn't load drill files that are too small so duplicate first tool
my $runtime = time(); #Time::HiRes::gettimeofday(); #measure my execution time
print STDERR "Loaded config settings from '${\(__FILE__)}'.\n";
1; #last value must be truthful to indicate successful load
#############################################################################################
#junk/experiment:
#use Package::Constants;
#use Exporter qw(import); #https://perldoc.perl.org/Exporter.html
#my $caller = "pdf2gerb::";
#sub cfg
#{
# my $proto = shift;
# my $class = ref($proto) || $proto;
# my $settings =
# {
# $WANT_DEBUG => 990, #10; #level of debug wanted; higher == more, lower == less, 0 == none
# };
# bless($settings, $class);
# return $settings;
#}
#use constant HELLO => "hi there2"; #"main::HELLO" => "hi there";
#use constant GOODBYE => 14; #"main::GOODBYE" => 12;
#print STDERR "read cfg file\n";
#our @EXPORT_OK = Package::Constants->list(__PACKAGE__); #https://www.perlmonks.org/?node_id=1072691; NOTE: "_OK" skips short/common names
#print STDERR scalar(@EXPORT_OK) . " consts exported:\n";
#foreach(@EXPORT_OK) { print STDERR "$_\n"; }
#my $val = main::thing("xyz");
#print STDERR "caller gave me $val\n";
#foreach my $arg (@ARGV) { print STDERR "arg $arg\n"; }
Author: swannman
Source Code: https://github.com/swannman/pdf2gerb
License: GPL-3.0 license
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In this R article, we will learn about What Is R Programming Language? introduction & Basics. R is a programming language developed by Ross Ihaka and Robert Gentleman in 1993. R possesses an extensive catalog of statistical and graphical methods. It includes machine learning algorithms, linear regression, time series, statistical inference to name a few. Most of the R libraries are written in R, but for heavy computational tasks, C, C++, and Fortran codes are preferred.
Data analysis with R is done in a series of steps; programming, transforming, discovering, modeling and communicating the results
As conclusion, R is the world’s most widely used statistics programming language. It’s the 1st choice of data scientists and supported by a vibrant and talented community of contributors. R is taught in universities and deployed in mission-critical business applications.
Windows Installation – We can download the Windows installer version of R from R-3.2.2 for windows (32/64)
As it is a Windows installer (.exe) with the name “R-version-win.exe”. You can just double click and run the installer accepting the default settings. If your Windows is a 32-bit version, it installs the 32-bit version. But if your windows are 64-bit, then it installs both the 32-bit and 64-bit versions.
After installation, you can locate the icon to run the program in a directory structure “R\R3.2.2\bin\i386\Rgui.exe” under the Windows Program Files. Clicking this icon brings up the R-GUI which is the R console to do R Programming.
R Programming is a very popular programming language that is broadly used in data analysis. The way in which we define its code is quite simple. The “Hello World!” is the basic program for all the languages, and now we will understand the syntax of R programming with the “Hello world” program. We can write our code either in the command prompt, or we can use an R script file.
Once you have R environment setup, then it’s easy to start your R command prompt by just typing the following command at your command prompt −
$R
This will launch R interpreter and you will get a prompt > where you can start typing your program as follows −
>myString <- "Hello, World"
>print (myString)
[1] "Hello, World!"
Here the first statement defines a string variable myString, where we assign a string “Hello, World!” and then the next statement print() is being used to print the value stored in myString variable.
While doing programming in any programming language, you need to use various variables to store various information. Variables are nothing but reserved memory locations to store values. This means that when you create a variable you reserve some space in memory.
In contrast to other programming languages like C and java in R, the variables are not declared as some data type. The variables are assigned with R-Objects and the data type of the R-object becomes the data type of the variable. There are many types of R-objects. The frequently used ones are −
#create a vector and find the elements which are >5
v<-c(1,2,3,4,5,6,5,8)
v[v>5]
#subset
subset(v,v>5)
#position in the vector created in which square of the numbers of v is >10 holds good
which(v*v>10)
#to know the values
v[v*v>10]
Output: [1] 6 8
Output: [1] 6 8
Output: [1] 4 5 6 7 8
Output: [1] 4 5 6 5 8
A matrix is a two-dimensional rectangular data set. It can be created using a vector input to the matrix function.
#matrices: a vector with two dimensional attributes
mat<-matrix(c(1,2,3,4))
mat1<-matrix(c(1,2,3,4),nrow=2)
mat1
Output: [,1] [,2] [1,] 1 3 [2,] 2 4
mat2<-matrix(c(1,2,3,4),ncol=2,byrow=T)
mat2
Output: [,1] [,2] [1,] 1 2 [2,] 3 4
mat3<-matrix(c(1,2,3,4),byrow=T)
mat3
#transpose of matrix
mattrans<-t(mat)
mattrans
#create a character matrix called fruits with elements apple, orange, pear, grapes
fruits<-matrix(c("apple","orange","pear","grapes"),2)
#create 3×4 matrix of marks obtained in each quarterly exams for 4 different subjects
X<-matrix(c(50,70,40,90,60, 80,50, 90,100, 50,30, 70),nrow=3)
X
#give row names and column names
rownames(X)<-paste(prefix="Test.",1:3)
subs<-c("Maths", "English", "Science", "History")
colnames(X)<-subs
X
Output: [,1] [1,] 1 [2,] 2 [3,] 3 [4,] 4 Output: [,1] [,2] [,3] [,4] [1,] 1 2 3 4 Output: [,1] [,2] [,3] [,4] [1,] 50 90 50 50 [2,] 70 60 90 30 [3,] 40 80 100 70 Output: Maths English Science History Test. 1 50 90 50 50 Test. 2 70 60 90 30 Test. 3 40 80 100 70
While matrices are confined to two dimensions, arrays can be of any number of dimensions. The array function takes a dim attribute which creates the required number of dimensions. In the below example we create an array with two elements which are 3×3 matrices each.
#Arrays
arr<-array(1:24,dim=c(3,4,2))
arr
#create an array using alphabets with dimensions 3 rows, 2 columns and 3 arrays
arr1<-array(letters[1:18],dim=c(3,2,3))
#select only 1st two matrix of an array
arr1[,,c(1:2)]
#LIST
X<-list(u=2, n='abc')
X
X$u
[,1] [,2] [,3] [,4]
[,1] [,2] [,3] [,4]
[,1] [,2]
[,1] [,2]
Data frames are tabular data objects. Unlike a matrix in a data frame, each column can contain different modes of data. The first column can be numeric while the second column can be character and the third column can be logical. It is a list of vectors of equal length.
#Dataframes
students<-c("J","L","M","K","I","F","R","S")
Subjects<-rep(c("science","maths"),each=2)
marks<-c(55,70,66,85,88,90,56,78)
data<-data.frame(students,Subjects,marks)
#Accessing dataframes
data[[1]]
data$Subjects
data[,1]
Output: [1] J L M K I F R S Levels: F I J K L M R S Output: data$Subjects [1] science science maths maths science science maths maths Levels: maths science
Factors are the r-objects which are created using a vector. It stores the vector along with the distinct values of the elements in the vector as labels. The labels are always character irrespective of whether it is numeric or character or Boolean etc. in the input vector. They are useful in statistical modeling.
Factors are created using the factor() function. The nlevels function gives the count of levels.
#Factors
x<-c(1,2,3)
factor(x)
#apply function
data1<-data.frame(age=c(55,34,42,66,77),bmi=c(26,25,21,30,22))
d<-apply(data1,2,mean)
d
#create two vectors age and gender and find mean age with respect to gender
age<-c(33,34,55,54)
gender<-factor(c("m","f","m","f"))
tapply(age,gender,mean)
Output: [1] 1 2 3 Levels: 1 2 3 Output: age bmi 54.8 24.8 Output: f m 44 44
A variable provides us with named storage that our programs can manipulate. A variable in R can store an atomic vector, a group of atomic vectors, or a combination of many R objects. A valid variable name consists of letters, numbers, and the dot or underlines characters.
total, sum, .fine.with.dot, this_is_acceptable, Number5
tot@l, 5um, _fine, TRUE, .0ne
Earlier versions of R used underscore (_) as an assignment operator. So, the period (.) was used extensively in variable names having multiple words. Current versions of R support underscore as a valid identifier but it is good practice to use a period as word separators.
For example, a.variable.name is preferred over a_variable_name or alternatively we could use camel case as aVariableName.
Constants, as the name suggests, are entities whose value cannot be altered. Basic types of constant are numeric constants and character constants.
Numeric Constants
All numbers fall under this category. They can be of type integer, double or complex. It can be checked with the typeof() function.
Numeric Constants followed by L are regarded as integers and those followed by i are regarded as complex.
> typeof(5)
> typeof(5L)
> typeof(5L)
[1] “double” [1] “double” [[1] “double”
Character Constants
Character constants can be represented using either single quotes (‘) or double quotes (“) as delimiters.
> 'example'
> typeof("5")
[1] "example" [1] "character"
Operators – Arithmetic, Relational, Logical, Assignment, and some of the Miscellaneous Operators that R programming language provides.
There are four main categories of Operators in the R programming language.
x <- 35
y<-10
x+y > x-y > x*y > x/y > x%/%y > x%%y > x^y [1] 45 [1] 25 [1] 350 [1] 3.5 [1] 3 [1] 5 [1]2.75e+15
The below table shows the logical operators in R. Operators & and | perform element-wise operation producing result having a length of the longer operand. But && and || examines only the first element of the operands resulting in a single length logical vector.
a <- c(TRUE,TRUE,FALSE,0,6,7)
b <- c(FALSE,TRUE,FALSE,TRUE,TRUE,TRUE)
a&b
[1] FALSE TRUE FALSE FALSE TRUE TRUE
a&&b
[1] FALSE
> a|b
[1] TRUE TRUE FALSE TRUE TRUE TRUE
> a||b
[1] TRUE
> !a
[1] FALSE FALSE TRUE TRUE FALSE FALSE
> !b
[1] TRUE FALSE TRUE FALSE FALSE FALSE
Functions are defined using the function() directive and are stored as R objects just like anything else. In particular, they are R objects of class “function”. Here’s a simple function that takes no arguments simply prints ‘Hi statistics’.
#define the function
f <- function() {
print("Hi statistics!!!")
}
#Call the function
f()
Output: [1] "Hi statistics!!!"
Now let’s define a function called standardize, and the function has a single argument x which is used in the body of a function.
#Define the function that will calculate standardized score.
standardize = function(x) {
m = mean(x)
sd = sd(x)
result = (x – m) / sd
result
}
input<- c(40:50) #Take input for what we want to calculate a standardized score.
standardize(input) #Call the function
Output: standardize(input) #Call the function [1] -1.5075567 -1.2060454 -0.9045340 -0.6030227 -0.3015113 0.0000000 0.3015113 0.6030227 0.9045340 1.2060454 1.5075567
R has some very useful functions which implement looping in a compact form to make life easier. The very rich and powerful family of applied functions is made of intrinsically vectorized functions. These functions in R allow you to apply some function to a series of objects (eg. vectors, matrices, data frames, or files). They include:
There is another function called split() which is also useful, particularly in conjunction with lapply.
A vector is a sequence of data elements of the same basic type. Members in a vector are officially called components. Vectors are the most basic R data objects and there are six types of atomic vectors. They are logical, integer, double, complex, character, and raw.
The c() function can be used to create vectors of objects by concatenating things together.
x <- c(1,2,3,4,5) #double
x #If you use only x auto-printing occurs
l <- c(TRUE, FALSE) #logical
l <- c(T, F) ## logical
c <- c("a", "b", "c", "d") ## character
i <- 1:20 ## integer
cm <- c(2+2i, 3+3i) ## complex
print(l)
print(c)
print(i)
print(cm)
You can see the type of each vector using typeof() function in R.
typeof(x)
typeof(l)
typeof(c)
typeof(i)
typeof(cm)
Output: print(l) [1] TRUE FALSE print(c) [1] "a" "b" "c" "d" print(i) [1] 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 print(cm) [1] 2+2i 3+3i Output: typeof(x) [1] "double" typeof(l) [1] "logical" typeof(c) [1] "character" typeof(i) [1] "integer" typeof(cm) [1] "complex"
We can use the seq() function to create a vector within an interval by specifying step size or specifying the length of the vector.
seq(1:10) #By default it will be incremented by 1
seq(1, 20, length.out=5) # specify length of the vector
seq(1, 20, by=2) # specify step size
Output: > seq(1:10) #By default it will be incremented by 1 [1] 1 2 3 4 5 6 7 8 9 10 > seq(1, 20, length.out=5) # specify length of the vector [1] 1.00 5.75 10.50 15.25 20.00 > seq(1, 20, by=2) # specify step size [1] 1 3 5 7 9 11 13 15 17 19
Elements of a vector can be accessed using indexing. The vector indexing can be logical, integer, or character. The [ ] brackets are used for indexing. Indexing starts with position 1, unlike most programming languages where indexing starts from 0.
We can use integers as an index to access specific elements. We can also use negative integers to return all elements except that specific element.
x<- 101:110
x[1] #access the first element
x[c(2,3,4,5)] #Extract 2nd, 3rd, 4th, and 5th elements
x[5:10] #Extract all elements from 5th to 10th
x[c(-5,-10)] #Extract all elements except 5th and 10th
x[-c(5:10)] #Extract all elements except from 5th to 10th
Output: x[1] #Extract the first element [1] 101 x[c(2,3,4,5)] #Extract 2nd, 3rd, 4th, and 5th elements [1] 102 103 104 105 x[5:10] #Extract all elements from 5th to 10th [1] 105 106 107 108 109 110 x[c(-5,-10)] #Extract all elements except 5th and 10th [1] 101 102 103 104 106 107 108 109 x[-c(5:10)] #Extract all elements except from 5th to 10th [1] 101 102 103 104
If you use a logical vector for indexing, the position where the logical vector is TRUE will be returned.
x[x < 105]
x[x>=104]
Output: x[x < 105] [1] 101 102 103 104 x[x>=104] [1] 104 105 106 107 108 109 110
We can modify a vector and assign a new value to it. You can truncate a vector by using reassignments. Check the below example.
x<- 10:12
x[1]<- 101 #Modify the first element
x
x[2]<-102 #Modify the 2nd element
x
x<- x[1:2] #Truncate the last element
x
Output: x [1] 101 11 12 x[2]<-102 #Modify the 2nd element x [1] 101 102 12 x<- x[1:2] #Truncate the last element x [1] 101 102
We can use arithmetic operations on two vectors of the same length. They can be added, subtracted, multiplied, or divided. Check the output of the below code.
# Create two vectors.
v1 <- c(1:10)
v2 <- c(101:110)
# Vector addition.
add.result <- v1+v2
print(add.result)
# Vector subtraction.
sub.result <- v2-v1
print(sub.result)
# Vector multiplication.
multi.result <- v1*v2
print(multi.result)
# Vector division.
divi.result <- v2/v1
print(divi.result)
Output: print(add.result) [1] 102 104 106 108 110 112 114 116 118 120 print(sub.result) [1] 100 100 100 100 100 100 100 100 100 100 print(multi.result) [1] 101 204 309 416 525 636 749 864 981 1100 print(divi.result) [1] 101.00000 51.00000 34.33333 26.00000 21.00000 17.66667 15.28571 13.50000 12.11111 11.00000
The minimum and the maximum of a vector can be found using the min() or the max() function. range() is also available which returns the minimum and maximum in a vector.
x<- 1001:1010
max(x) # Find the maximum
min(x) # Find the minimum
range(x) #Find the range
Output: max(x) # Find the maximum [1] 1010 min(x) # Find the minimum [1] 1001 range(x) #Find the range [1] 1001 1010
The list is a data structure having elements of mixed data types. A vector having all elements of the same type is called an atomic vector but a vector having elements of a different type is called list.
We can check the type with typeof() or class() function and find the length using length()function.
x <- list("stat",5.1, TRUE, 1 + 4i)
x
class(x)
typeof(x)
length(x)
Output: x [[1]] [1] "stat" [[2]] [1] 5.1 [[3]] [1] TRUE [[4]] [1] 1+4i class(x) [1] “list” typeof(x) [1] “list” length(x) [1] 4
You can create an empty list of a prespecified length with the vector() function.
x <- vector("list", length = 10)
x
Output: x [[1]] NULL [[2]] NULL [[3]] NULL [[4]] NULL [[5]] NULL [[6]] NULL [[7]] NULL [[8]] NULL [[9]] NULL [[10]] NULL
Lists can be subset using two syntaxes, the $ operator, and square brackets []. The $ operator returns a named element of a list. The [] syntax returns a list, while the [[]] returns an element of a list.
# subsetting
l$e
l["e"]
l[1:2]
l[c(1:2)] #index using integer vector
l[-c(3:length(l))] #negative index to exclude elements from 3rd up to last.
l[c(T,F,F,F,F)] # logical index to access elements
Output: > l$e [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 1 0 0 0 0 0 0 0 0 0 [2,] 0 1 0 0 0 0 0 0 0 0 [3,] 0 0 1 0 0 0 0 0 0 0 [4,] 0 0 0 1 0 0 0 0 0 0 [5,] 0 0 0 0 1 0 0 0 0 0 [6,] 0 0 0 0 0 1 0 0 0 0 [7,] 0 0 0 0 0 0 1 0 0 0 [8,] 0 0 0 0 0 0 0 1 0 0 [9,] 0 0 0 0 0 0 0 0 1 0 [10,] 0 0 0 0 0 0 0 0 0 1 > l["e"] $e [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 1 0 0 0 0 0 0 0 0 0 [2,] 0 1 0 0 0 0 0 0 0 0 [3,] 0 0 1 0 0 0 0 0 0 0 [4,] 0 0 0 1 0 0 0 0 0 0 [5,] 0 0 0 0 1 0 0 0 0 0 [6,] 0 0 0 0 0 1 0 0 0 0 [7,] 0 0 0 0 0 0 1 0 0 0 [8,] 0 0 0 0 0 0 0 1 0 0 [9,] 0 0 0 0 0 0 0 0 1 0 [10,] 0 0 0 0 0 0 0 0 0 1 > l[1:2] [[1]] [1] 1 2 3 4 [[2]] [1] FALSE > l[c(1:2)] #index using integer vector [[1]] [1] 1 2 3 4 [[2]] [1] FALSE > l[-c(3:length(l))] #negative index to exclude elements from 3rd up to last. [[1]] [1] 1 2 3 4 [[2]] [1] FALSE l[c(T,F,F,F,F)] [[1]] [1] 1 2 3 4
We can change components of a list through reassignment.
l[["name"]] <- "Kalyan Nandi"
l
Output: [[1]] [1] 1 2 3 4 [[2]] [1] FALSE [[3]] [1] “Hello Statistics!” $d function (arg = 42) { print(“Hello World!”) } $name [1] “Kalyan Nandi”
In R Programming Matrix is a two-dimensional data structure. They contain elements of the same atomic types. A Matrix can be created using the matrix() function. R can also be used for matrix calculations. Matrices have rows and columns containing a single data type. In a matrix, the order of rows and columns is important. Dimension can be checked directly with the dim() function and all attributes of an object can be checked with the attributes() function. Check the below example.
Creating a matrix in R
m <- matrix(nrow = 2, ncol = 3)
dim(m)
attributes(m)
m <- matrix(1:20, nrow = 4, ncol = 5)
m
Output: dim(m) [1] 2 3 attributes(m) $dim [1] 2 3 m <- matrix(1:20, nrow = 4, ncol = 5) m [,1] [,2] [,3] [,4] [,5] [1,] 1 5 9 13 17 [2,] 2 6 10 14 18 [3,] 3 7 11 15 19 [4,] 4 8 12 16 20
Matrices can be created by column-binding or row-binding with the cbind() and rbind() functions.
x<-1:3
y<-10:12
z<-30:32
cbind(x,y,z)
rbind(x,y,z)
Output: cbind(x,y,z) x y z [1,] 1 10 30 [2,] 2 11 31 [3,] 3 12 32 rbind(x,y,z) [,1] [,2] [,3] x 1 2 3 y 10 11 12 z 30 31 32
By default, the matrix function reorders a vector into columns, but we can also tell R to use rows instead.
x <-1:9
matrix(x, nrow = 3, ncol = 3)
matrix(x, nrow = 3, ncol = 3, byrow = TRUE)
Output cbind(x,y,z) x y z [1,] 1 10 30 [2,] 2 11 31 [3,] 3 12 32 rbind(x,y,z) [,1] [,2] [,3] x 1 2 3 y 10 11 12 z 30 31 32
In R, Arrays are the data types that can store data in more than two dimensions. An array can be created using the array() function. It takes vectors as input and uses the values in the dim parameter to create an array. If you create an array of dimensions (2, 3, 4) then it creates 4 rectangular matrices each with 2 rows and 3 columns. Arrays can store only data type.
We can give names to the rows, columns, and matrices in the array by setting the dimnames parameter.
v1 <- c(1,2,3)
v2 <- 100:110
col.names <- c("Col1","Col2","Col3","Col4","Col5","Col6","Col7")
row.names <- c("Row1","Row2")
matrix.names <- c("Matrix1","Matrix2")
arr4 <- array(c(v1,v2), dim=c(2,7,2), dimnames = list(row.names,col.names, matrix.names))
arr4
Output: , , Matrix1 Col1 Col2 Col3 Col4 Col5 Col6 Col7 Row1 1 3 101 103 105 107 109 Row2 2 100 102 104 106 108 110 , , Matrix2 Col1 Col2 Col3 Col4 Col5 Col6 Col7 Row1 1 3 101 103 105 107 109 Row2 2 100 102 104 106 108 110
# Print the 2nd row of the 1st matrix of the array.
print(arr4[2,,1])
# Print the element in the 2nd row and 4th column of the 2nd matrix.
print(arr4[2,4,2])
# Print the 2nd Matrix.
print(arr4[,,2])
Output: > print(arr4[2,,1]) Col1 Col2 Col3 Col4 Col5 Col6 Col7 2 100 102 104 106 108 110 > > # Print the element in the 2nd row and 4th column of the 2nd matrix. > print(arr4[2,4,2]) [1] 104 > > # Print the 2nd Matrix. > print(arr4[,,2]) Col1 Col2 Col3 Col4 Col5 Col6 Col7 Row1 1 3 101 103 105 107 109 Row2 2 100 102 104 106 108 110
Factors are used to represent categorical data and can be unordered or ordered. An example might be “Male” and “Female” if we consider gender. Factor objects can be created with the factor() function.
x <- factor(c("male", "female", "male", "male", "female"))
x
table(x)
Output: x [1] male female male male female Levels: female male table(x) x female male 2 3
By default, Levels are put in alphabetical order. If you print the above code you will get levels as female and male. But if you want to get your levels in a particular order then set levels parameter like this.
x <- factor(c("male", "female", "male", "male", "female"), levels=c("male", "female"))
x
table(x)
Output: x [1] male female male male female Levels: male female table(x) x male female 3 2
Data frames are used to store tabular data in R. They are an important type of object in R and are used in a variety of statistical modeling applications. Data frames are represented as a special type of list where every element of the list has to have the same length. Each element of the list can be thought of as a column and the length of each element of the list is the number of rows. Unlike matrices, data frames can store different classes of objects in each column. Matrices must have every element be the same class (e.g. all integers or all numeric).
Data frames can be created explicitly with the data.frame() function.
employee <- c('Ram','Sham','Jadu')
salary <- c(21000, 23400, 26800)
startdate <- as.Date(c('2016-11-1','2015-3-25','2017-3-14'))
employ_data <- data.frame(employee, salary, startdate)
employ_data
View(employ_data)
Output: employ_data employee salary startdate 1 Ram 21000 2016-11-01 2 Sham 23400 2015-03-25 3 Jadu 26800 2017-03-14 View(employ_data)
If you look at the structure of the data frame now, you see that the variable employee is a character vector, as shown in the following output:
str(employ_data)
Output: > str(employ_data) 'data.frame': 3 obs. of 3 variables: $ employee : Factor w/ 3 levels "Jadu","Ram","Sham": 2 3 1 $ salary : num 21000 23400 26800 $ startdate: Date, format: "2016-11-01" "2015-03-25" "2017-03-14"
Note that the first column, employee, is of type factor, instead of a character vector. By default, data.frame() function converts character vector into factor. To suppress this behavior, we can pass the argument stringsAsFactors=FALSE.
employ_data <- data.frame(employee, salary, startdate, stringsAsFactors = FALSE)
str(employ_data)
Output: 'data.frame': 3 obs. of 3 variables: $ employee : chr "Ram" "Sham" "Jadu" $ salary : num 21000 23400 26800 $ startdate: Date, format: "2016-11-01" "2015-03-25" "2017-03-14"
The primary location for obtaining R packages is CRAN.
You can obtain information about the available packages on CRAN with the available.packages() function.
a <- available.packages()
head(rownames(a), 30) # Show the names of the first 30 packages
Packages can be installed with the install.packages() function in R. To install a single package, pass the name of the lecture to the install.packages() function as the first argument.
The following code installs the ggplot2 package from CRAN.
install.packages(“ggplot2”)
You can install multiple R packages at once with a single call to install.packages(). Place the names of the R packages in a character vector.
install.packages(c(“caret”, “ggplot2”, “dplyr”))
Loading packages
Installing a package does not make it immediately available to you in R; you must load the package. The library() function is used to load packages into R. The following code is used to load the ggplot2 package into R. Do not put the package name in quotes.
library(ggplot2)
If you have Installed your packages without root access using the command install.packages(“ggplot2″, lib=”/data/Rpackages/”). Then to load use the below command.
library(ggplot2, lib.loc=”/data/Rpackages/”)
After loading a package, the functions exported by that package will be attached to the top of the search() list (after the workspace).
library(ggplot2)
search()
In R, we can read data from files stored outside the R environment. We can also write data into files that will be stored and accessed by the operating system. R can read and write into various file formats like CSV, Excel, XML, etc.
We can check which directory the R workspace is pointing to using the getwd() function. You can also set a new working directory using setwd()function.
# Get and print current working directory.
print(getwd())
# Set current working directory.
setwd("/web/com")
# Get and print current working directory.
print(getwd())
Output: [1] "/web/com/1441086124_2016" [1] "/web/com"
The CSV file is a text file in which the values in the columns are separated by a comma. Let’s consider the following data present in the file named input.csv.
You can create this file using windows notepad by copying and pasting this data. Save the file as input.csv using the save As All files(*.*) option in notepad.
Following is a simple example of read.csv() function to read a CSV file available in your current working directory −
data <- read.csv("input.csv")
print(data)
id, name, salary, start_date, dept
Pie charts are created with the function pie(x, labels=) where x is a non-negative numeric vector indicating the area of each slice and labels= notes a character vector of names for the slices.
The basic syntax for creating a pie-chart using the R is −
pie(x, labels, radius, main, col, clockwise)
Following is the description of the parameters used −
# Simple Pie Chart
slices <- c(10, 12,4, 16, 8)
lbls <- c("US", "UK", "Australia", "Germany", "France")
pie(slices, labels = lbls, main="Pie Chart of Countries")
3-D pie chart
The pie3D( ) function in the plotrix package provides 3D exploded pie charts.
# 3D Exploded Pie Chart
library(plotrix)
slices <- c(10, 12, 4, 16, 8)
lbls <- c("US", "UK", "Australia", "Germany", "France")
pie3D(slices,labels=lbls,explode=0.1,
main="Pie Chart of Countries ")
A bar chart represents data in rectangular bars with a length of the bar proportional to the value of the variable. R uses the function barplot() to create bar charts. R can draw both vertical and Horizontal bars in the bar chart. In the bar chart, each of the bars can be given different colors.
Let us suppose, we have a vector of maximum temperatures (in degree Celsius) for seven days as follows.
max.temp <- c(22, 27, 26, 24, 23, 26, 28)
barplot(max.temp)
Some of the frequently used ones are, “main” to give the title, “xlab” and “ylab” to provide labels for the axes, names.arg for naming each bar, “col” to define color, etc.
We can also plot bars horizontally by providing the argument horiz=TRUE.
# barchart with added parameters
barplot(max.temp,
main = "Maximum Temperatures in a Week",
xlab = "Degree Celsius",
ylab = "Day",
names.arg = c("Sun", "Mon", "Tue", "Wed", "Thu", "Fri", "Sat"),
col = "darkred",
horiz = TRUE)
Simply doing barplot(age) will not give us the required plot. It will plot 10 bars with height equal to the student’s age. But we want to know the number of students in each age category.
This count can be quickly found using the table() function, as shown below.
> table(age)
age
16 17 18 19
1 2 6 1
Now plotting this data will give our required bar plot. Note below, that we define the argument “density” to shade the bars.
barplot(table(age),
main="Age Count of 10 Students",
xlab="Age",
ylab="Count",
border="red",
col="blue",
density=10
)
A histogram represents the frequencies of values of a variable bucketed into ranges. Histogram is similar to bar chat but the difference is it groups the values into continuous ranges. Each bar in histogram represents the height of the number of values present in that range.
R creates histogram using hist() function. This function takes a vector as an input and uses some more parameters to plot histograms.
The basic syntax for creating a histogram using R is −
hist(v,main,xlab,xlim,ylim,breaks,col,border)
Following is the description of the parameters used −
A simple histogram is created using input vector, label, col, and border parameters.
The script given below will create and save the histogram in the current R working directory.
# Create data for the graph.
v <- c(9,13,21,8,36,22,12,41,31,33,19)
# Give the chart file a name.
png(file = "histogram.png")
# Create the histogram.
hist(v,xlab = "Weight",col = "yellow",border = "blue")
# Save the file.
dev.off()
To specify the range of values allowed in X axis and Y axis, we can use the xlim and ylim parameters.
The width of each bar can be decided by using breaks.
# Create data for the graph.
v <- c(9,13,21,8,36,22,12,41,31,33,19)
# Give the chart file a name.
png(file = "histogram_lim_breaks.png")
# Create the histogram.
hist(v,xlab = "Weight",col = "green",border = "red", xlim = c(0,40), ylim = c(0,5),
breaks = 5)
# Save the file.
dev.off()
The debate around data analytics tools has been going on forever. Each time a new one comes out, comparisons transpire. Although many aspects of the tool remain subjective, beginners want to know which tool is better to start with.
The most popular and widely used tools for data analytics are R and SAS. Both of them have been around for a long time and are often pitted against each other. So, let’s compare them based on the most relevant factors.
Final Verdict
As per estimations by the Economic Times, the analytics industry will grow to $16 billion till 2025 in India. If you wish to venture into this domain, there can’t be a better time. Just start learning the tool you think is better based on the comparison points above.
Original article source at: https://www.mygreatlearning.com
1625843760
When installing Machine Learning Services in SQL Server by default few Python Packages are installed. In this article, we will have a look on how to get those installed python package information.
When we choose Python as Machine Learning Service during installation, the following packages are installed in SQL Server,
#machine learning #sql server #executing python in sql server #machine learning using python #machine learning with sql server #ml in sql server using python #python in sql server ml #python packages #python packages for machine learning services #sql server machine learning services
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This tutorial is an improvement of my previous post, where I extracted multiple tables without Python pandas
. In this tutorial, I will use the same PDF file, as that used in my previous post, with the difference that I manipulate the extracted tables with Python pandas
.
The code of this tutorial can be downloaded from my Github repository.
Almost all the pages of the analysed PDF file have the following structure:
Image by Author
In the top-right part of the page, there is the name of the Italian region, while in the bottom-right part of the page there is a table.
Image by Author
I want to extract both the region names and the tables for all the pages. I need to extract the bounding box for both the tables. The full procedure to measure margins is illustrated in my previous post, section Define margins.
This script implements the following steps:
[top,left,bottom,width]
. Data within the bounding box are expressed in cm. They must be converted to PDF points, since tabula-py
requires them in this format. We set the conversion factor fc = 28.28
.read_pdf()
functionpandas
dataframe.In this example, we scan the pdf twice: firstly to extract the regions names, secondly, to extract tables. Thus we need to define two bounding boxes.
#data-collection #tabula-py #data-science #pdf-extraction #python #how to extract tables from pdf using python pandas and tabula-py
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No programming language is pretty much as diverse as Python. It enables building cutting edge applications effortlessly. Developers are as yet investigating the full capability of end-to-end Python development services in various areas.
By areas, we mean FinTech, HealthTech, InsureTech, Cybersecurity, and that's just the beginning. These are New Economy areas, and Python has the ability to serve every one of them. The vast majority of them require massive computational abilities. Python's code is dynamic and powerful - equipped for taking care of the heavy traffic and substantial algorithmic capacities.
Programming advancement is multidimensional today. Endeavor programming requires an intelligent application with AI and ML capacities. Shopper based applications require information examination to convey a superior client experience. Netflix, Trello, and Amazon are genuine instances of such applications. Python assists with building them effortlessly.
Python can do such numerous things that developers can't discover enough reasons to admire it. Python application development isn't restricted to web and enterprise applications. It is exceptionally adaptable and superb for a wide range of uses.
Robust frameworks
Python is known for its tools and frameworks. There's a structure for everything. Django is helpful for building web applications, venture applications, logical applications, and mathematical processing. Flask is another web improvement framework with no conditions.
Web2Py, CherryPy, and Falcon offer incredible capabilities to customize Python development services. A large portion of them are open-source frameworks that allow quick turn of events.
Simple to read and compose
Python has an improved sentence structure - one that is like the English language. New engineers for Python can undoubtedly understand where they stand in the development process. The simplicity of composing allows quick application building.
The motivation behind building Python, as said by its maker Guido Van Rossum, was to empower even beginner engineers to comprehend the programming language. The simple coding likewise permits developers to roll out speedy improvements without getting confused by pointless subtleties.
Utilized by the best
Alright - Python isn't simply one more programming language. It should have something, which is the reason the business giants use it. Furthermore, that too for different purposes. Developers at Google use Python to assemble framework organization systems, parallel information pusher, code audit, testing and QA, and substantially more. Netflix utilizes Python web development services for its recommendation algorithm and media player.
Massive community support
Python has a steadily developing community that offers enormous help. From amateurs to specialists, there's everybody. There are a lot of instructional exercises, documentation, and guides accessible for Python web development solutions.
Today, numerous universities start with Python, adding to the quantity of individuals in the community. Frequently, Python designers team up on various tasks and help each other with algorithmic, utilitarian, and application critical thinking.
Progressive applications
Python is the greatest supporter of data science, Machine Learning, and Artificial Intelligence at any enterprise software development company. Its utilization cases in cutting edge applications are the most compelling motivation for its prosperity. Python is the second most well known tool after R for data analytics.
The simplicity of getting sorted out, overseeing, and visualizing information through unique libraries makes it ideal for data based applications. TensorFlow for neural networks and OpenCV for computer vision are two of Python's most well known use cases for Machine learning applications.
Thinking about the advances in programming and innovation, Python is a YES for an assorted scope of utilizations. Game development, web application development services, GUI advancement, ML and AI improvement, Enterprise and customer applications - every one of them uses Python to its full potential.
The disadvantages of Python web improvement arrangements are regularly disregarded by developers and organizations because of the advantages it gives. They focus on quality over speed and performance over blunders. That is the reason it's a good idea to utilize Python for building the applications of the future.
#python development services #python development company #python app development #python development #python in web development #python software development