Sean Robertson

Sean Robertson

1548820602

Iterate through numpy array testing multiple elements efficiently

I have the following code which iterates through 2d numpy array named "m". It works extremely slow. How can I transform this code using numpy functions so that I avoid using the for loops?

pairs = []
for i in range(size):
    for j in range(size):
        if(i >= j):
            continue
        if(m[i][j] + m[j][i] >= 0.75):
            pairs.append([i, j, m[i][j] + m[j][i]])


#python #numpy

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Buddha Community

Poppy Cooke

1548824947

You can use vectorised approach using NumPy. The idea is:

  • First initialize a matrix m and then create m+m.T which is equivalent to m[i][j] + m[j][i]where m.T is the matrix transpose and call it summ
  • np.triu(summ) returns the upper triangular part of the matrix (This is equivalent to ignoring the lower part by using continue in your code). This avoids explicit if(i >= j): in your code. Here you have to use k=1 to exclude the diagonal elements. By default, k=0 which includes the diagonal elements as well.
  • Then you get the indices of points using np.argwhere where the sum m+m.T is greater than equal to 0.75
  • Then you store those indices and the corresponding values in a list for later processing/printing purposes.

Verifiable example (using a small 3x3 random dataset)

import numpy as np

np.random.seed(0)
m = np.random.rand(3,3)
summ = m + m.T

index = np.argwhere(np.triu(summ, k=1)>=0.75)

pairs = [(x,y, summ[x,y]) for x,y in index]
print (pairs)
# # [(0, 1, 1.2600725493693163), (0, 2, 1.0403505873343364), (1, 2, 1.537667113848736)]

Further performance improvement

I just worked out an even faster approach to generate the final pairs list avoiding explicit for loops as

pairs = list(zip(index[:, 0], index[:, 1], summ[index[:,0], index[:,1]]))

Luna  Hermann

Luna Hermann

1595467140

NumPy Array Tutorial - Python NumPy Array Operations and Methods

The most important feature of NumPy is the homogeneous high-performance n-dimensional array object. Data manipulation in Python is nearly equivalent to the manipulation of NumPy arrays. NumPy array manipulation is basically related to accessing data and sub-arrays. It also includes array splitting, reshaping, and joining of arrays. Even the other external libraries in Python relate to NumPy arrays.

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Numpy Array Basics

Arrays in NumPy are synonymous with lists in Python with a homogenous nature. The homogeneity helps to perform smoother mathematical operations. These arrays are mutable. NumPy is useful to perform basic operations like finding the dimensions, the bite-size, and also the data types of elements of the array.

NumPy Array Creation

Array Creation in NumPy

1. Using the NumPy functions

NumPy has a variety of built-in functions to create an array.

a. Creating one-dimensional array in NumPy

For 1-D arrays the most common function is np.arange(…), passing any value create an array from 0 to that number.

  1. import numpy as np
  2. array=np.arange(20)
  3. array

Output

array([ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11,12, 13, 14, 15, 16, 17, 18, 19])

We can check the dimensions by using array.shape.

#numpy tutorials #array in numpy #numpy array #python numpy array

Bailee  Streich

Bailee Streich

1619660285

Linear Algebra for Data Scientists with NumPy - Analytics India Magazine

A geek in Machine Learning with a Master’s degree in…

####### READ NEXT

Delhivery Promises To Fly Charters With Oxygen Concentrators In India

NumPy is an essential Python library to perform mathematical and scientific computations. NumPy offers Python’s array-like data structures with exclusive operations and methods. Many data science libraries and frameworks, including PandasScikit-Learn, Statsmodels, Matplotlib and SciPy, are built on top of NumPy with Numpy arrays in their building blocks. Some frameworks, including TensorFlow and PyTorch, introduce NumPy arrays or NumPy-alike arrays as their fundamental data structure in the name of tensors.

NumPy in data scienceHow NumPy becomes the base of Data Science computing system (source)

Data Science relies heavily on Linear Algebra. NumPy is famous for its Linear Algebra operations. This article discusses methods available in the NumPy library to perform various Linear Algebra operations with examples. These examples assume that the readers have a basic understanding of NumPy arrays. Check out the following articles to have a better understanding of NumPy fundamentals:

  1. Fundamental Concepts of NumPy
  2. Basic Programming with NumPy
  3. Top Resources to Learn NumPy

#developers corner #linear algebra #matrices #numpy #numpy array #numpy dot product #numpy matrix multiplication #numpy tutorial #svd #vectors

Tamia  Walter

Tamia Walter

1596754901

Testing Microservices Applications

The shift towards microservices and modular applications makes testing more important and more challenging at the same time. You have to make sure that the microservices running in containers perform well and as intended, but you can no longer rely on conventional testing strategies to get the job done.

This is where new testing approaches are needed. Testing your microservices applications require the right approach, a suitable set of tools, and immense attention to details. This article will guide you through the process of testing your microservices and talk about the challenges you will have to overcome along the way. Let’s get started, shall we?

A Brave New World

Traditionally, testing a monolith application meant configuring a test environment and setting up all of the application components in a way that matched the production environment. It took time to set up the testing environment, and there were a lot of complexities around the process.

Testing also requires the application to run in full. It is not possible to test monolith apps on a per-component basis, mainly because there is usually a base code that ties everything together, and the app is designed to run as a complete app to work properly.

Microservices running in containers offer one particular advantage: universal compatibility. You don’t have to match the testing environment with the deployment architecture exactly, and you can get away with testing individual components rather than the full app in some situations.

Of course, you will have to embrace the new cloud-native approach across the pipeline. Rather than creating critical dependencies between microservices, you need to treat each one as a semi-independent module.

The only monolith or centralized portion of the application is the database, but this too is an easy challenge to overcome. As long as you have a persistent database running on your test environment, you can perform tests at any time.

Keep in mind that there are additional things to focus on when testing microservices.

  • Microservices rely on network communications to talk to each other, so network reliability and requirements must be part of the testing.
  • Automation and infrastructure elements are now added as codes, and you have to make sure that they also run properly when microservices are pushed through the pipeline
  • While containerization is universal, you still have to pay attention to specific dependencies and create a testing strategy that allows for those dependencies to be included

Test containers are the method of choice for many developers. Unlike monolith apps, which lets you use stubs and mocks for testing, microservices need to be tested in test containers. Many CI/CD pipelines actually integrate production microservices as part of the testing process.

Contract Testing as an Approach

As mentioned before, there are many ways to test microservices effectively, but the one approach that developers now use reliably is contract testing. Loosely coupled microservices can be tested in an effective and efficient way using contract testing, mainly because this testing approach focuses on contracts; in other words, it focuses on how components or microservices communicate with each other.

Syntax and semantics construct how components communicate with each other. By defining syntax and semantics in a standardized way and testing microservices based on their ability to generate the right message formats and meet behavioral expectations, you can rest assured knowing that the microservices will behave as intended when deployed.

Ways to Test Microservices

It is easy to fall into the trap of making testing microservices complicated, but there are ways to avoid this problem. Testing microservices doesn’t have to be complicated at all when you have the right strategy in place.

There are several ways to test microservices too, including:

  • Unit testing: Which allows developers to test microservices in a granular way. It doesn’t limit testing to individual microservices, but rather allows developers to take a more granular approach such as testing individual features or runtimes.
  • Integration testing: Which handles the testing of microservices in an interactive way. Microservices still need to work with each other when they are deployed, and integration testing is a key process in making sure that they do.
  • End-to-end testing: Which⁠—as the name suggests⁠—tests microservices as a complete app. This type of testing enables the testing of features, UI, communications, and other components that construct the app.

What’s important to note is the fact that these testing approaches allow for asynchronous testing. After all, asynchronous development is what makes developing microservices very appealing in the first place. By allowing for asynchronous testing, you can also make sure that components or microservices can be updated independently to one another.

#blog #microservices #testing #caylent #contract testing #end-to-end testing #hoverfly #integration testing #microservices #microservices architecture #pact #testing #unit testing #vagrant #vcr

Software Testing 101: Regression Tests, Unit Tests, Integration Tests

Automation and segregation can help you build better software
If you write automated tests and deliver them to the customer, he can make sure the software is working properly. And, at the end of the day, he paid for it.

Ok. We can segregate or separate the tests according to some criteria. For example, “white box” tests are used to measure the internal quality of the software, in addition to the expected results. They are very useful to know the percentage of lines of code executed, the cyclomatic complexity and several other software metrics. Unit tests are white box tests.

#testing #software testing #regression tests #unit tests #integration tests

Dejah  Reinger

Dejah Reinger

1599859380

How to Do API Testing?

Nowadays API testing is an integral part of testing. There are a lot of tools like postman, insomnia, etc. There are many articles that ask what is API, What is API testing, but the problem is How to do API testing? What I need to validate.

Note: In this article, I am going to use postman assertions for all the examples since it is the most popular tool. But this article is not intended only for the postman tool.

Let’s directly jump to the topic.

Let’s consider you have an API endpoint example http://dzone.com/getuserDetails/{{username}} when you send the get request to that URL it returns the JSON response.

My API endpoint is http://dzone.com/getuserDetails/{{username}}

The response is in JSON format like below

JSON

{
  "jobTitle": "string",
  "userid": "string",
  "phoneNumber": "string",
  "password": "string",
  "email": "user@example.com",
  "firstName": "string",
  "lastName": "string",
  "userName": "string",
  "country": "string",
  "region": "string",
  "city": "string",
  "department": "string",
  "userType": 0
}

In the JSON we can see there are properties and associated values.

Now, For example, if we need details of the user with the username ‘ganeshhegde’ we need to send a **GET **request to **http://dzone.com/getuserDetails/ganeshhegde **

dzone.com

Now there are two scenarios.

1. Valid Usecase: User is available in the database and it returns user details with status code 200

2. Invalid Usecase: User is Unavailable/Invalid user in this case it returns status with code 404 with not found message.

#tutorial #performance #api #test automation #api testing #testing and qa #application programming interface #testing as a service #testing tutorial #api test